Negative regulation of kinase activity

Across TCGA patient cohorts, RNA activity of the Negative regulation of kinase activity pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SALL4, PRSS33, and PHF1, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of kinase activity activity versus SALL4 in COAD (Pearson r = -0.03).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SALL4 →	+1.635	+0.193	.003	<.001	2	1
COAD	PRSS33 →	+2.733	+0.143	<.001	.001	2	1
COAD	PHF1 →	+0.668	+0.112	.008	.008	2	1
COAD	EFNB2 →	+1.023	+0.136	<.001	.003	2	1
COAD	USHBP1 →	+0.320	+0.157	.004	.005	2	1
COAD	MICAL2 →	+0.808	+0.152	.004	.004	2	1

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0033673 vs SALL4 — COAD

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