Regulation of nuclease activity

pathway activity — cross-omics
GO:0032069Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of nuclease activity pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are KIF20B, SKA3, and ZNF25, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADKIF20B →+0.651+0.221<.001<.00136
BRCASKA3 →+0.809+0.218<.001<.00136
UCECZNF25 →-0.422-0.190.007.00235
LUADKIF15 →+0.739+0.162.001.00335
LUADVRK1 →+0.533+0.201.001.00135
BRCASTAT1 →+1.041+0.303<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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