Wybutosine metabolic process

pathway activity — cross-omics
GO:0031590Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Wybutosine metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CDC42P1, RWDD4P1, and PAXIP1-DT, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCDC42P1 →+0.371+0.669.007.00733
UCECRWDD4P1 →+0.532+0.614.008<.00133
OVPAXIP1-DT →+1.405+0.132.003.00133
PDACPOU5F1P3 →+0.434+0.712.001.00533
LUADLRRC4 →+0.625+0.874.001.00132
LUADSHBG →+0.169+0.927.004<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration