Regulation of gliogenesis

pathway activity — cross-omics
GO:0014013Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of gliogenesis pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RN7SL334P, GLRB, and ZAP70, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of gliogenesis activity versus RN7SL334P in HNSC (Pearson r = 0.24).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRN7SL334P →+0.764+0.145.004.00134
PDACGLRB →-0.595-0.209.001<.00133
HNSCZAP70 →+0.896+0.148<.001<.00133
PDACPDE5A →-0.333-0.154<.001<.00133
PDACSLC43A2 →+0.422+0.171<.001.00733
PDACNCR3 →+0.459+0.211<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0014013 vs RN7SL334P — HNSC

Per-sample scatter of Regulation of gliogenesis activity vs RN7SL334P in HNSC.

Explore this scatter interactively →

Exploration