Cholesterol storage

pathway activity — cross-omics
GO:0010878Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cholesterol storage pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RENBP, SEPTIN4, and DAB2, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRENBP →+0.413+0.090<.001<.00138
LSCCSEPTIN4 →+0.348+0.075<.001<.00138
GBMDAB2 →+0.713+0.071<.001<.00138
UCECPIK3R1 →+0.228+0.065.004.00338
OVTNS2_S102 →+0.869+0.046<.001.00338
OVPRKG1 →+0.721+0.067<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration