Positive regulation of triglyceride biosynthetic process

pathway activity — cross-omics
GO:0010867Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of triglyceride biosynthetic process pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DPEP2, PLIN5, and ELANE, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of triglyceride biosynthetic process activity versus DPEP2 in LSCC (Pearson r = 0.22).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDPEP2 →+0.335+0.426.005.00335
BRCAPLIN5 →+1.485+0.488<.001<.00134
GBMELANE →+0.553+0.159<.001<.00125
GBMDPF3 →+0.636+0.139.002.00534
LSCCLINC02157 →+0.545+0.705<.001<.00134
LSCCCD37 →+0.630+0.578<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010867 vs DPEP2 — LSCC

Per-sample scatter of Positive regulation of triglyceride biosynthetic process activity vs DPEP2 in LSCC.

Explore this scatter interactively →

Exploration