I-kappaB phosphorylation

pathway activity — cross-omics
GO:0007252Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the I-kappaB phosphorylation pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are VDAC1P13, TRIM22, and WNT7A, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADVDAC1P13 →-0.582-0.280.003.00735
LSCCTRIM22 →+0.545+0.159<.001.00534
LSCCWNT7A →+0.859+0.186.001.00434
LSCCRORA-AS2 →+0.251+0.164<.001.00434
LUADFAM161A →-0.382-0.237.004.00534
PDACIFIT3 →+0.706+0.173.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration