Glandular epithelial cell development

pathway activity — cross-omics
GO:0002068Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Glandular epithelial cell development pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PYY2, CNNM1, and CHRNA7, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACPYY2 →-0.369-0.557.001.00734
HNSCCNNM1 →-0.739-0.814.003.00133
HNSCCHRNA7 →-0.225-0.735.004.00733
HNSCSKINT1L →-0.394-0.592.002.00933
PDACPSMC6 →+0.180+0.548.005.00533
PDACGRIK5 →-0.309-0.575<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration