ZNF556

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZNF556 mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ZNF556-associated genes across cancer lineages are GAPDH, Caspase-7-cleavedD198, and eIF4E. Each is linked with ZNF556 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF556-to-partner and partner-to-ZNF556 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAPDH grouped by ZNF556-low versus ZNF556-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF556→partner) and Y-score (partner→ZNF556) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGAPDH →+0.391+2.321.047.03332
UCECCaspase-7-cleavedD198 →+0.616+1.827.004.01532
UCECeIF4E →+0.202+3.807.009<.00131
UCECeIF4G →+0.302+1.847.008.00831
UCECFoxM1 →+0.246+1.847.009.00831
UCECFOXO3a_pS318_S321 →-0.110-2.077.016.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

GAPDH by ZNF556 expression — UCEC

Box plot of GAPDH in ZNF556-low vs ZNF556-high samples in UCEC.

Explore this box plot interactively →

Exploration