ZNF552

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF552 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible ZNF552-associated genes across cancer lineages are TEX47, S100G, and ELOA3DP. Each is linked with ZNF552 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF552-to-partner and partner-to-ZNF552 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TEX47 grouped by ZNF552-low versus ZNF552-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF552→partner) and Y-score (partner→ZNF552) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSTEX47 →+0.310+5.357<.001.00131
CNSS100G →+0.132+4.321<.001.00931
LARGE_INTESTINEELOA3DP →+0.044+4.273<.001.00631
STOMACHMBD3L2B →+0.042+4.432<.001.00331
STOMACHTRIM49D2 →+0.030+4.285<.001.00731
STOMACHSCYGR2 →+0.087+4.285<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

TEX47 by ZNF552 expression — CNS

Box plot of TEX47 in ZNF552-low vs ZNF552-high samples in CNS.

Explore this box plot interactively →

Exploration