ZMYM3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZMYM3 mutation is significantly associated with the RNA expression of many other genes, with 5,323 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ZMYM3-associated genes across cancer lineages are SENP3, UBAP1, and EIF1AX. Each is linked with ZMYM3 in more than 2 cancer types. Because this analysis shows association rather than direction, both ZMYM3-to-partner and partner-to-ZMYM3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SENP3 grouped by ZMYM3-low versus ZMYM3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZMYM3→partner) and Y-score (partner→ZMYM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSENP3 →+0.391+1.530<.001<.00133
UCECUBAP1 →+0.383+1.652<.001<.00133
UCECEIF1AX →+0.438+1.280<.001<.00133
UCECVTA1 →+0.328+1.736<.001<.00133
UCECLINC01399 →+0.157+1.357<.001<.00133
UCECMMP12 →+0.929+1.879<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,323 associations by consensus.

SENP3 by ZMYM3 expression — UCEC

Box plot of SENP3 in ZMYM3-low vs ZMYM3-high samples in UCEC.

Explore this box plot interactively →

Exploration