long intergenic non-protein coding RNA 1399Genealiases: []
Q-omics provides the consensus-scored LINC01399 profile across patient tissues and cancer cell-line models. LINC01399 expression is associated with patient survival in 16 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, LINC01399 is differentially expressed in 12, with the highest sampling consensus in HNSC. Additionally, LINC01399 RNA expression shows 11,698 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight ACC, HNSC, and THYM as cancer lineages where LINC01399 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.
Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.
Premium analyses for LINC01399 — synthetic lethality, tumor antigen, and pembrolizumab response.
This table summarizes LINC01399 survival associations across molecular data types. LINC01399 RNA expression shows survival associations in the most cancer types (16). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
This table ranks reproducible LINC01399 RNA expression–survival associations across cancer types. High LINC01399 expression shows unfavorable associations in ACC, KIRC and LAML, but favorable associations in BRCA, READ and THYM. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for LINC01399 RNA expression.
This table summarizes LINC01399 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 12. The strongest signals are observed in HNSC for RNA.
This table ranks reproducible tumor–normal expression differences for LINC01399. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. LINC01399 shows lower tumor expression in COAD and higher tumor expression in HNSC, KICH, BRCA, LUAD and BLCA. The HNSC box plot shows higher LINC01399 RNA expression in tumor versus normal tissue (log2 FC = +0.260, t-test p < 0.001).
This table shows molecular features associated with LINC01399 in patient tissues and cancer cell lines. In patient samples, LINC01399 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
