WHSC1L2P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WHSC1L2P RNA expression is significantly associated with the protein abundance of many other proteins, with 13,620 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible WHSC1L2P-associated proteins across cancer lineages are NSD3, ATP7A, and GGA2. Each is linked with WHSC1L2P in more than 4 cancer types. Because this analysis shows association rather than direction, both WHSC1L2P-to-partner and partner-to-WHSC1L2P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, WHSC1L2P versus NSD3 in BRCA, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (WHSC1L2P→partner) and Y-score (partner→WHSC1L2P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANSD3 →+0.659+0.538<.001<.00135
LUADATP7A →+0.286+0.204.001<.00133
GBMGGA2 →-0.278-0.208<.001<.00133
HNSCMYO1E →-0.318-0.608<.001.00333
BRCANUP153 →+0.279+0.378.003.00524
GBMNXF1 →+0.205+0.177<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,620 associations by consensus.

WHSC1L2P vs NSD3 — BRCA

Per-sample scatter of WHSC1L2P vs NSD3 in BRCA (Pearson r = 0.52).

Explore this scatter interactively →

Exploration