WFDC5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WFDC5 mutation is significantly associated with the RNA expression of many other genes, with 86 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible WFDC5-associated genes across cancer lineages are IGKV3D-34, RNU6-739P, and RN7SL504P. Each is linked with WFDC5 in more than 1 cancer types. Because this analysis shows association rather than direction, both WFDC5-to-partner and partner-to-WFDC5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IGKV3D-34 grouped by WFDC5-low versus WFDC5-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WFDC5→partner) and Y-score (partner→WFDC5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADIGKV3D-34 →+0.121+5.332<.001.00232
SKCMRNU6-739P →+0.308+6.219<.001<.00132
LUSCRN7SL504P →+0.235+6.438<.001.00132
BRCAMIR6749 →+0.345+5.950<.001.00131
BRCANPIPA2 →+0.024+6.342<.001<.00131
BRCATPRX2P →+0.030+4.540.006.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 86 associations by consensus.

IGKV3D-34 by WFDC5 expression — COAD

Box plot of IGKV3D-34 in WFDC5-low vs WFDC5-high samples in COAD.

Explore this box plot interactively →

Exploration