WDR90

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WDR90 mutation is significantly associated with the RNA expression of many other genes, with 5,273 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible WDR90-associated genes across cancer lineages are GLRX5, HES6, and RCHY1. Each is linked with WDR90 in more than 3 cancer types. Because this analysis shows association rather than direction, both WDR90-to-partner and partner-to-WDR90 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GLRX5 grouped by WDR90-low versus WDR90-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR90→partner) and Y-score (partner→WDR90) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGLRX5 →+0.263+1.447.007.00534
UCECHES6 →+0.659+1.869.004.00434
UCECRCHY1 →+0.495+2.280<.001<.00134
UCECLRR1 →+0.580+4.269<.001<.00134
UCECRAD51 →+0.597+2.403<.001<.00134
UCECWDR76 →+0.821+2.869<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,273 associations by consensus.

GLRX5 by WDR90 expression — UCEC

Box plot of GLRX5 in WDR90-low vs WDR90-high samples in UCEC.

Explore this box plot interactively →

Exploration