WDR88

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WDR88 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,164 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible WDR88-associated proteins across cancer lineages are ZNF219_S114, CPSF3, and USP15_S229. Each is linked with WDR88 in more than 5 cancer types. Because this analysis shows association rather than direction, both WDR88-to-partner and partner-to-WDR88 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, WDR88 versus ZNF219_S114 in HNSC, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR88→partner) and Y-score (partner→WDR88) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCZNF219_S114 →+1.001+0.798<.001<.00136
HNSCCPSF3 →+0.206+0.767<.001<.00136
CCRCCUSP15_S229 →-0.534-0.640.004<.00135
LSCCSAE1 →+0.279+0.699<.001<.00135
LSCCLIG3 →+0.429+0.685<.001<.00135
HNSCMICALL1 →-0.292-0.434<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,164 associations by consensus.

WDR88 vs ZNF219_S114 — HNSC

Per-sample scatter of WDR88 vs ZNF219_S114 in HNSC (Pearson r = 0.46).

Explore this scatter interactively →

Exploration