WDR88

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, WDR88 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible WDR88-associated genes across cancer lineages are OPN1MW, C20orf85, and IL22. Each is linked with WDR88 in more than 1 cancer types. Because this analysis shows association rather than direction, both WDR88-to-partner and partner-to-WDR88 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OPN1MW grouped by WDR88-low versus WDR88-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR88→partner) and Y-score (partner→WDR88) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOPN1MW →+0.016+4.415.001.00731
BLOOD_LeukemiaC20orf85 →+0.049+5.969<.001.00131
BLOOD_LeukemiaIL22 →+0.050+6.569<.001<.00131
BLOOD_LeukemiaLRRTM3 →+0.006+5.539<.001.00331
BLOOD_LeukemiaOR2A5 →+0.021+4.922<.001.00931
LARGE_INTESTINEGSG1L2 →+0.011+3.700<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

OPN1MW by WDR88 expression — SKIN

Box plot of OPN1MW in WDR88-low vs WDR88-high samples in SKIN.

Explore this box plot interactively →

Exploration