WDR38

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, WDR38 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible WDR38-associated genes across cancer lineages are SMIM9, DEFB135, and CGB5. Each is linked with WDR38 in more than 1 cancer types. Because this analysis shows association rather than direction, both WDR38-to-partner and partner-to-WDR38 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SMIM9 grouped by WDR38-low versus WDR38-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR38→partner) and Y-score (partner→WDR38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINSMIM9 →+0.058+4.977<.001.00731
SKINDEFB135 →+0.640+5.415<.001.00431
BLOOD_LeukemiaCGB5 →+0.083+4.409<.001.00531
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

SMIM9 by WDR38 expression — SKIN

Box plot of SMIM9 in WDR38-low vs WDR38-high samples in SKIN.

Explore this box plot interactively →

Exploration