VPS13A

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, VPS13A RNA expression is significantly associated with the go_rna of many other GO terms, with 3,908 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible VPS13A-associated GO terms across cancer lineages are Golgi to endosome transport, Post-Golgi vesicle-mediated transport, and Positive regulation of organelle assembly. Each is linked with VPS13A in more than 16 cancer types. Because this analysis shows association rather than direction, both VPS13A-to-partner and partner-to-VPS13A results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VPS13A→partner) and Y-score (partner→VPS13A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHGolgi to endosome transport →+0.121+0.903<.001.001317
STOMACHPost-Golgi vesicle-mediated transport →+0.072+1.115.002.001315
BONEPositive regulation of organelle assembly →+0.065+1.211<.001<.001314
LUNG_SCLCTermination of RNA polymerase II transcription →+0.125+0.990<.001<.001314
LUNG_SCLCProtein localization to cytoplasmic stress granule →+0.130+0.700<.001.006214
LUNG_SCLCProtein sumoylation →+0.086+0.960.001.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,908 associations by consensus.

Exploration