VPS13A-AS1

Across TCGA patient cohorts, VPS13A-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,392 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible VPS13A-AS1-associated proteins across cancer lineages are RAB31, ITPR1, and NUP153_S174. Each is linked with VPS13A-AS1 in more than 2 cancer types. Because this analysis shows association rather than direction, both VPS13A-AS1-to-partner and partner-to-VPS13A-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VPS13A-AS1 versus RAB31 in CCRCC, with a Pearson correlation of -0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VPS13A-AS1→partner) and Y-score (partner→VPS13A-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	RAB31 →	-0.258	-0.432	.002	<.001	3	3
COAD	ITPR1 →	-0.317	-0.064	.003	.004	3	3
LSCC	NUP153_S174 →	+1.059	+0.465	<.001	<.001	3	2
LSCC	PFDN6 →	+0.181	+0.339	<.001	<.001	3	2
LSCC	SNRNP40 →	+0.137	+0.273	<.001	<.001	3	2
LSCC	SUPT4H1 →	+0.425	+0.371	.002	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,392 associations by consensus.

VPS13A-AS1 vs RAB31 — CCRCC

Explore this scatter interactively →