VPS13A-AS1

Across TCGA patient cohorts, VPS13A-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,846 significant associations in total. STAD shows the largest number of these associations.

The most reproducible VPS13A-AS1-associated GO terms across cancer lineages are Amino acid metabolic process, Carbohydrate catabolic process, and Establishment of protein localization to membrane. Each is linked with VPS13A-AS1 in more than 9 cancer types. Because this analysis shows association rather than direction, both VPS13A-AS1-to-partner and partner-to-VPS13A-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Amino acid metabolic process grouped by VPS13A-AS1-low versus VPS13A-AS1-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VPS13A-AS1→partner) and Y-score (partner→VPS13A-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Amino acid metabolic process →	+0.044	+0.160	.001	<.001	3	10
ESCA	Carbohydrate catabolic process →	+0.056	+0.227	<.001	<.001	3	10
STAD	Establishment of protein localization to membrane →	+0.057	+0.221	<.001	<.001	3	10
UVM	Morphogenesis of a polarized epithelium →	+0.029	+0.046	<.001	<.001	3	9
STAD	Pyruvate metabolic process →	+0.052	+0.240	<.001	<.001	3	9
STAD	Vacuole organization →	+0.058	+0.223	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,846 associations by consensus.

Amino acid metabolic process by VPS13A-AS1 expression — ESCA

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