VIM-AS1

Across TCGA patient cohorts, VIM-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 20,947 significant associations in total. GBM shows the largest number of these associations.

The most reproducible VIM-AS1-associated proteins across cancer lineages are VIM_S56, DPYD, and MYO1G. Each is linked with VIM-AS1 in more than 5 cancer types. Because this analysis shows association rather than direction, both VIM-AS1-to-partner and partner-to-VIM-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VIM-AS1 versus VIM_S56 in BRCA, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VIM-AS1→partner) and Y-score (partner→VIM-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	VIM_S56 →	+0.804	+1.453	<.001	<.001	3	6
GBM	DPYD →	+0.628	+0.442	<.001	<.001	3	6
GBM	MYO1G →	+0.563	+0.526	<.001	<.001	3	6
BRCA	VIM →	+0.587	+1.112	<.001	<.001	3	6
HNSC	SLC27A1 →	+0.499	+0.908	<.001	<.001	3	5
LSCC	MRPL20 →	-0.304	-0.474	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,947 associations by consensus.

VIM-AS1 vs VIM_S56 — BRCA

Explore this scatter interactively →