VASP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VASP mutation is significantly associated with the RNA expression of many other genes, with 1,648 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VASP-associated genes across cancer lineages are MORF4L1P6, NDUFS5P5, and MIR4307HG. Each is linked with VASP in more than 1 cancer types. Because this analysis shows association rather than direction, both VASP-to-partner and partner-to-VASP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MORF4L1P6 grouped by VASP-low versus VASP-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VASP→partner) and Y-score (partner→VASP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAMORF4L1P6 →+0.159+7.640<.001.00932
COADNDUFS5P5 →+0.354+5.374<.001.00132
COADMIR4307HG →+0.062+5.003<.001.00432
SKCMGLULP6 →+0.052+5.097<.001.00832
SKCMOR11H12 →+0.044+6.199<.001.00132
BLCAMTND3P8 →+0.144+7.640<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,648 associations by consensus.

MORF4L1P6 by VASP expression — BLCA

Box plot of MORF4L1P6 in VASP-low vs VASP-high samples in BLCA.

Explore this box plot interactively →

Exploration