USP30-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, USP30-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,219 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible USP30-AS1-associated proteins across cancer lineages are GBP4, PSMB6, and CORO1A. Each is linked with USP30-AS1 in more than 9 cancer types. Because this analysis shows association rather than direction, both USP30-AS1-to-partner and partner-to-USP30-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USP30-AS1 versus GBP4 in BRCA, with a Pearson correlation of 0.60.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (USP30-AS1→partner) and Y-score (partner→USP30-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGBP4 →+0.597+0.527<.001<.001310
OVPSMB6 →-0.439-0.688<.001<.00139
OVCORO1A →+0.709+0.759<.001<.00139
OVDOCK2 →+0.649+0.680<.001<.00139
BRCAGBP1 →+0.787+0.570<.001<.00139
BRCAAPOL3 →+0.777+0.663<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,219 associations by consensus.

USP30-AS1 vs GBP4 — BRCA

Per-sample scatter of USP30-AS1 vs GBP4 in BRCA (Pearson r = 0.60).

Explore this scatter interactively →

Exploration