USHBP1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, USHBP1 mutation is significantly associated with the RNA expression of many other genes, with 26 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible USHBP1-associated genes across cancer lineages are BRDT, OR2T6, and SLC32A1. Each is linked with USHBP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both USHBP1-to-partner and partner-to-USHBP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, BRDT grouped by USHBP1-low versus USHBP1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USHBP1→partner) and Y-score (partner→USHBP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaBRDT →+0.159+4.342<.001.00232
SOFT_TISSUEOR2T6 →+0.012+4.930<.001.00831
BLOOD_LeukemiaSLC32A1 →+0.946+3.901<.001.00631
BLOOD_LeukemiaHCN4 →+0.037+3.855.002.00731
BLOOD_LeukemiaAWAT2 →+0.012+3.705<.001.00731
BLOOD_LeukemiaDIRAS2 →+0.122+4.087<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

BRDT by USHBP1 expression — BLOOD_Leukemia

Box plot of BRDT in USHBP1-low vs USHBP1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration