TXN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TXN protein abundance is significantly associated with the RNA expression of many other genes, with 4,146 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible TXN-associated genes across cancer lineages are AKR1C1, ISCA1, and TXNRD1. Each is linked with TXN in more than 6 cancer types. Because this analysis shows association rather than direction, both TXN-to-partner and partner-to-TXN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TXN versus AKR1C1 in LUNG_NSCLC_LUAD, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TXN→partner) and Y-score (partner→TXN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADAKR1C1 →+3.731+1.351.004.00337
PANCREASISCA1 →+0.894+1.742.005<.00136
UPPER_AERODIGESTIVE_TRACTTXNRD1 →+2.126+2.083.003.00136
PANCREASMRRF →+0.628+1.400.004<.00136
KIDNEYUGDH →+1.992+1.088.001.00336
UPPER_AERODIGESTIVE_TRACTEIF3E →+0.859+1.589.008.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,146 associations by consensus.

TXN vs AKR1C1 — LUNG_NSCLC_LUAD

Per-sample scatter of TXN vs AKR1C1 in LUNG_NSCLC_LUAD (Pearson r = 0.42).

Explore this scatter interactively →

Exploration