TUBA3E

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TUBA3E mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible TUBA3E-associated genes across cancer lineages are OR1L1, CCL8, and KRT32. Each is linked with TUBA3E in more than 1 cancer types. Because this analysis shows association rather than direction, both TUBA3E-to-partner and partner-to-TUBA3E results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR1L1 grouped by TUBA3E-low versus TUBA3E-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TUBA3E→partner) and Y-score (partner→TUBA3E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCOR1L1 →+0.052+5.029<.001.00631
BLOOD_LeukemiaCCL8 →+0.018+3.705.004.00731
BLOOD_LeukemiaKRT32 →+0.015+4.384<.001.00631
BLOOD_LeukemiaAADACL2 →+0.017+4.507<.001.00131
BLOOD_LeukemiaSPINK8 →+0.284+3.944.004.00631
LARGE_INTESTINEJAKMIP1 →+0.221+2.562<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

OR1L1 by TUBA3E expression — LUNG_SCLC

Box plot of OR1L1 in TUBA3E-low vs TUBA3E-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration