TSSK6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TSSK6 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,504 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TSSK6-associated GO terms across cancer lineages are Transcription pausing by RNA polymerase II, Energy coupled proton transmembrane transport, against electrochemical gradient, and Electron transport coupled proton transport. Each is linked with TSSK6 in more than 12 cancer types. Because this analysis shows association rather than direction, both TSSK6-to-partner and partner-to-TSSK6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transcription pausing by RNA polymerase II grouped by TSSK6-low versus TSSK6-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TSSK6→partner) and Y-score (partner→TSSK6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONETranscription pausing by RNA polymerase II →+0.187+0.753<.001<.001313
SKINEnergy coupled proton transmembrane transport, against electrochemical gradient →+0.101+0.582<.001<.001313
SKINElectron transport coupled proton transport →+0.101+0.582<.001<.001313
OESOPHAGUSSperm motility →-0.133-0.942<.001<.001312
OESOPHAGUSFlagellated sperm motility →-0.133-0.942<.001<.001312
UPPER_AERODIGESTIVE_TRACTNegative regulation of transcription elongation by RNA polymerase II →+0.134+0.511<.001.002312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,504 associations by consensus.

Transcription pausing by RNA polymerase II by TSSK6 expression — BONE

Box plot of Transcription pausing by RNA polymerase II in TSSK6-low vs TSSK6-high samples in BONE.

Explore this box plot interactively →

Exploration