TNFRSF10C

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNFRSF10C protein abundance is significantly associated with the RNA expression of many other genes, with 11,183 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TNFRSF10C-associated genes across cancer lineages are CXCL1, CXCL8, and CSF3. Each is linked with TNFRSF10C in more than 4 cancer types. Because this analysis shows association rather than direction, both TNFRSF10C-to-partner and partner-to-TNFRSF10C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TNFRSF10C versus CXCL1 in LSCC, with a Pearson correlation of 0.69.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFRSF10C→partner) and Y-score (partner→TNFRSF10C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCXCL1 →+2.052+1.212<.001<.00135
GBMCXCL8 →+2.442+1.120<.001<.00135
UCECCSF3 →+1.225+1.028.001<.00134
BRCALIF →+1.563+1.657<.001<.00134
LSCCFLT1P1 →+0.349+0.867<.001<.00134
PDACLINC01506 →+1.039+1.509.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,183 associations by consensus.

TNFRSF10C vs CXCL1 — LSCC

Per-sample scatter of TNFRSF10C vs CXCL1 in LSCC (Pearson r = 0.69).

Explore this scatter interactively →

Exploration