TMEM139-AS1

Across TCGA patient cohorts, TMEM139-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,016 significant associations in total. KIRP shows the largest number of these associations.

The most reproducible TMEM139-AS1-associated GO terms across cancer lineages are DNA biosynthetic process, Signal transduction in response to DNA damage, and Cell cycle G1/S phase transition. Each is linked with TMEM139-AS1 in more than 26 cancer types. Because this analysis shows association rather than direction, both TMEM139-AS1-to-partner and partner-to-TMEM139-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA biosynthetic process grouped by TMEM139-AS1-low versus TMEM139-AS1-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM139-AS1→partner) and Y-score (partner→TMEM139-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	DNA biosynthetic process →	+0.061	+0.159	<.001	<.001	3	27
ESCA	Signal transduction in response to DNA damage →	+0.059	+0.172	<.001	<.001	3	26
ESCA	Cell cycle G1/S phase transition →	+0.056	+0.194	<.001	<.001	3	26
ESCA	RNA 3'-end processing →	+0.054	+0.177	<.001	<.001	3	26
ESCA	Obsolete positive regulation of histone methylation →	+0.058	+0.136	<.001	<.001	3	25
STAD	Cell cycle G2/M phase transition →	+0.061	+0.181	<.001	<.001	3	25

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,016 associations by consensus.

DNA biosynthetic process by TMEM139-AS1 expression — ESCA

Explore this box plot interactively →