TKFC

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TKFC RNA expression is significantly associated with the RNA expression of many other genes, with 19,000 significant associations in total. ACC shows the largest number of these associations.

The most reproducible TKFC-associated genes across cancer lineages are GPR137, INTS5, and TMEM179B. Each is linked with TKFC in more than 32 cancer types. Because this analysis shows association rather than direction, both TKFC-to-partner and partner-to-TKFC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TKFC versus GPR137 in SCLC, with a Pearson correlation of 0.47.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TKFC→partner) and Y-score (partner→TKFC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCGPR137 →+1.875+0.560<.001<.001333
ACCINTS5 →+0.728+0.893<.001<.001332
ACCTMEM179B →+1.059+1.238<.001<.001332
ACCPAAF1 →+1.076+1.257<.001<.001332
UVMFOXRED1 →+0.862+0.868<.001<.001332
KICHSLC24A1 →+1.313+0.836<.001<.001332
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,000 associations by consensus.

TKFC vs GPR137 — SCLC

Per-sample scatter of TKFC vs GPR137 in SCLC (Pearson r = 0.47).

Explore this scatter interactively →

Exploration