TBC1D3F

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TBC1D3F RNA expression is significantly associated with the RNA expression of many other genes, with 2,657 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible TBC1D3F-associated genes across cancer lineages are YJEFN3, LINC01355, and CCNL2. Each is linked with TBC1D3F in more than 10 cancer types. Because this analysis shows association rather than direction, both TBC1D3F-to-partner and partner-to-TBC1D3F results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TBC1D3F versus YJEFN3 in SKCM, with a Pearson correlation of 0.23.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D3F→partner) and Y-score (partner→TBC1D3F) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMYJEFN3 →+0.864+0.003<.001<.001311
SKCMLINC01355 →+0.788+0.004<.001<.001311
SKCMCCNL2 →+0.869+0.004<.001<.001310
SKCMPDCL3P4 →+0.683+0.004<.001<.001310
LUADGSDMB →+0.659+0.006<.001<.00139
KIRCZNF692 →+0.619+0.006<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,657 associations by consensus.

TBC1D3F vs YJEFN3 — SKCM

Per-sample scatter of TBC1D3F vs YJEFN3 in SKCM (Pearson r = 0.23).

Explore this scatter interactively →

Exploration