TAT

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TAT mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TAT-associated genes across cancer lineages are C4orf50, TRIM77, and GPR101. Each is linked with TAT in more than 1 cancer types. Because this analysis shows association rather than direction, both TAT-to-partner and partner-to-TAT results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TAT→partner) and Y-score (partner→TAT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTC4orf50 →+0.013+4.736<.001.00931
UPPER_AERODIGESTIVE_TRACTTRIM77 →+0.030+5.357<.001.00331
BLOOD_LeukemiaGPR101 →+0.128+4.551<.001.00431
BLOOD_LeukemiaOR10T2 →+0.584+4.276.005.00731
BLOOD_LeukemiaUSP17L20 →+0.004+4.539<.001.00731
BLOOD_LeukemiaUSP17L18 →+0.004+4.539<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

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