SYP-AS1

Across TCGA patient cohorts, SYP-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,005 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SYP-AS1-associated GO terms across cancer lineages are Positive regulation of chromosome organization, Cytochrome complex assembly, and Methylation. Each is linked with SYP-AS1 in more than 15 cancer types. Because this analysis shows association rather than direction, both SYP-AS1-to-partner and partner-to-SYP-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of chromosome organization grouped by SYP-AS1-low versus SYP-AS1-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SYP-AS1→partner) and Y-score (partner→SYP-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Positive regulation of chromosome organization →	+0.056	+0.148	.001	<.001	3	15
ESCA	Cytochrome complex assembly →	+0.046	+0.144	.002	<.001	2	16
ESCA	Methylation →	+0.043	+0.162	.001	<.001	3	15
ESCA	Mitochondrial gene expression →	+0.051	+0.155	.001	<.001	2	16
ESCA	Oxidative phosphorylation →	+0.057	+0.154	.001	<.001	2	16
STAD	Intracellular protein transmembrane transport →	+0.054	+0.145	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,005 associations by consensus.

Positive regulation of chromosome organization by SYP-AS1 expression — ESCA

Explore this box plot interactively →