SYNPR-AS1

Across TCGA patient cohorts, SYNPR-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 22,225 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SYNPR-AS1-associated proteins across cancer lineages are TRIM2, SPR_S103, and CASP4. Each is linked with SYNPR-AS1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SYNPR-AS1-to-partner and partner-to-SYNPR-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYNPR-AS1 versus TRIM2 in HNSC, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNPR-AS1→partner) and Y-score (partner→SYNPR-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	TRIM2 →	+0.591	+0.715	<.001	<.001	3	6
PDAC	SPR_S103 →	+0.671	+1.102	<.001	<.001	3	6
HNSC	CASP4 →	-0.470	-0.712	<.001	<.001	3	6
BRCA	CBR4 →	+0.678	+1.102	<.001	<.001	3	6
GBM	MNDA →	-0.723	-0.531	.002	.005	3	5
GBM	MPP7 →	+0.595	+0.597	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 22,225 associations by consensus.

SYNPR-AS1 vs TRIM2 — HNSC

Explore this scatter interactively →