SYNE1-AS1

Across TCGA patient cohorts, SYNE1-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,436 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SYNE1-AS1-associated proteins across cancer lineages are SYNE1, RPS2, and RSU1. Each is linked with SYNE1-AS1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SYNE1-AS1-to-partner and partner-to-SYNE1-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYNE1-AS1 versus SYNE1 in UCEC, with a Pearson correlation of 0.48.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNE1-AS1→partner) and Y-score (partner→SYNE1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	SYNE1 →	+0.496	+0.942	<.001	<.001	3	6
HNSC	RPS2 →	-0.259	-0.743	<.001	<.001	3	5
UCEC	RSU1 →	+0.473	+0.665	<.001	<.001	3	5
UCEC	PPP1R12B →	+1.137	+0.653	<.001	.003	3	5
CCRCC	CAST_S577 →	+0.823	+0.822	<.001	<.001	3	5
UCEC	PGM5 →	+1.173	+0.789	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,436 associations by consensus.

SYNE1-AS1 vs SYNE1 — UCEC

Explore this scatter interactively →