STUB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, STUB1 protein abundance is significantly associated with the RNA expression of many other genes, with 13,765 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible STUB1-associated genes across cancer lineages are CIAO3, METRN, and RHBDL1. Each is linked with STUB1 in more than 6 cancer types. Because this analysis shows association rather than direction, both STUB1-to-partner and partner-to-STUB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STUB1 versus CIAO3 in BRCA, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STUB1→partner) and Y-score (partner→STUB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACIAO3 →+0.659+0.509<.001<.00137
BRCAMETRN →+1.370+0.512<.001<.00137
BRCARHBDL1 →+1.226+0.508<.001<.00137
OVDNAJA3 →+0.475+0.406<.001<.00136
BRCAGFER →+0.485+0.275.001.00736
OVNDUFB10 →+0.604+0.497<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,765 associations by consensus.

STUB1 vs CIAO3 — BRCA

Per-sample scatter of STUB1 vs CIAO3 in BRCA (Pearson r = 0.37).

Explore this scatter interactively →

Exploration