Across TCGA patient cohorts, STK39 protein abundance is significantly associated with the RNA expression of many other genes, with 9,945 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible STK39-associated genes across cancer lineages are PHF5GP, ILDR1, and ARFGEF3. Each is linked with STK39 in more than 6 cancer types. Because this analysis shows association rather than direction, both STK39-to-partner and partner-to-STK39 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STK39→partner) and Y-score (partner→STK39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	PHF5GP →	+1.139	+0.551	<.001	<.001	3	7
UCEC	ILDR1 →	+0.754	+0.475	.001	<.001	3	5
HNSC	ARFGEF3 →	+1.121	+0.299	.003	.002	2	6
GBM	PKP4 →	+0.651	+0.345	.004	.002	3	5
BRCA	RAB19 →	+0.788	+0.609	<.001	<.001	3	4
BRCA	MARVELD2 →	+0.669	+0.525	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,945 associations by consensus.

Exploration

STK39 survival (RNA) · tumor vs normal (RNA) · all STK39 data types