ST8SIA2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ST8SIA2 mutation is significantly associated with the RNA expression of many other genes, with 74 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ST8SIA2-associated genes across cancer lineages are KDELR3, TMEM147, and CHN2. Each is linked with ST8SIA2 in more than 1 cancer types. Because this analysis shows association rather than direction, both ST8SIA2-to-partner and partner-to-ST8SIA2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KDELR3 grouped by ST8SIA2-low versus ST8SIA2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ST8SIA2→partner) and Y-score (partner→ST8SIA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEKDELR3 →+1.377+3.502<.001.00131
LARGE_INTESTINETMEM147 →+0.389+3.502.006.00131
LARGE_INTESTINECHN2 →-1.131-3.416.001.00231
LARGE_INTESTINEATPAF1 →+0.599+3.502.002.00131
LARGE_INTESTINEARHGEF9 →-0.885-3.087.004.00731
LARGE_INTESTINEARGLU1 →-1.001-3.416.002.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 74 associations by consensus.

KDELR3 by ST8SIA2 expression — LARGE_INTESTINE

Box plot of KDELR3 in ST8SIA2-low vs ST8SIA2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration