ST6GALNAC3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ST6GALNAC3 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible ST6GALNAC3-associated genes across cancer lineages are OR10H5, FABP12, and AADACL2. Each is linked with ST6GALNAC3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ST6GALNAC3-to-partner and partner-to-ST6GALNAC3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ST6GALNAC3→partner) and Y-score (partner→ST6GALNAC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADOR10H5 →+0.028+3.343.004.00531
LUNG_NSCLC_LUADFABP12 →+0.111+3.215<.001.00731
LUNG_NSCLC_LUADAADACL2 →+0.026+3.343<.001.00531
LUNG_NSCLC_LUADOR2A5 →+0.019+3.481<.001.00431
LUNG_NSCLC_LUADZNF728 →+0.542+3.518<.001.00831
SKINAVPR1B →+0.009+4.415<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

Exploration