SSX4B

Across TCGA cell cohorts, SSX4B RNA expression is significantly associated with the go_rna of many other GO terms, with 352 significant associations in total. PANCREAS shows the largest number of these associations.

The most reproducible SSX4B-associated GO terms across cancer lineages are Nuclear transport, Leading strand elongation, and RNA surveillance. Each is linked with SSX4B in more than 3 cancer types. Because this analysis shows association rather than direction, both SSX4B-to-partner and partner-to-SSX4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear transport grouped by SSX4B-low versus SSX4B-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SSX4B→partner) and Y-score (partner→SSX4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	Nuclear transport →	+0.066	+0.026	<.001	.008	3	4
UPPER_AERODIGESTIVE_TRACT	Leading strand elongation →	+0.079	+0.014	.009	.005	3	3
UPPER_AERODIGESTIVE_TRACT	RNA surveillance →	+0.041	+0.016	.001	.008	3	3
SOFT_TISSUE	mRNA transport →	+0.058	+0.075	.007	.004	2	4
SOFT_TISSUE	Transcription by RNA polymerase I →	+0.058	+0.062	.004	.008	3	3
LUNG_NSCLC_LUAD	Glial cell-neuron signaling →	-0.140	-0.079	<.001	.004	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 352 associations by consensus.

Nuclear transport by SSX4B expression — PANCREAS

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