SPINK4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPINK4 protein abundance is significantly associated with the RNA expression of many other genes, with 3,816 significant associations in total. COAD shows the largest number of these associations.

The most reproducible SPINK4-associated genes across cancer lineages are CLDN20, RBM38-AS1, and ASS1P3. Each is linked with SPINK4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPINK4-to-partner and partner-to-SPINK4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPINK4 versus CLDN20 in COAD, with a Pearson correlation of -0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPINK4→partner) and Y-score (partner→SPINK4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCLDN20 →-0.418-0.919.002<.00132
COADRBM38-AS1 →-0.364-0.739<.001.00132
COADASS1P3 →+0.230+0.801.003.00432
COADDUSP14 →-0.387-0.829.003.00432
COADTOP3B →-0.042-0.816.004<.00131
COADLGALS2 →+1.076+0.987<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,816 associations by consensus.

SPINK4 vs CLDN20 — COAD

Per-sample scatter of SPINK4 vs CLDN20 in COAD (Pearson r = -0.32).

Explore this scatter interactively →

Exploration