SPATA3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA3 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,199 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SPATA3-associated proteins across cancer lineages are TARBP2, OCIAD1_S108, and PFKP. Each is linked with SPATA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPATA3-to-partner and partner-to-SPATA3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPATA3 versus TARBP2 in LSCC, with a Pearson correlation of -0.20.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA3→partner) and Y-score (partner→SPATA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTARBP2 →-0.169-0.013.001.00432
BRCAOCIAD1_S108 →+0.910+0.207<.001.00132
BRCAPFKP →+0.661+0.176<.001<.00132
BRCAPITPNM3_S907 →+0.665+0.159.002.00732
GBMSIRPA →+0.531+0.260<.001<.00132
BRCACA12 →-0.924-0.169<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,199 associations by consensus.

SPATA3 vs TARBP2 — LSCC

Per-sample scatter of SPATA3 vs TARBP2 in LSCC (Pearson r = -0.20).

Explore this scatter interactively →

Exploration