SOX9-AS1

Across TCGA patient cohorts, SOX9-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,762 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SOX9-AS1-associated proteins across cancer lineages are SOX9, NFIA, and SOX6_S411. Each is linked with SOX9-AS1 in more than 8 cancer types. Because this analysis shows association rather than direction, both SOX9-AS1-to-partner and partner-to-SOX9-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SOX9-AS1 versus SOX9 in LSCC, with a Pearson correlation of 0.64.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SOX9-AS1→partner) and Y-score (partner→SOX9-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SOX9 →	+0.985	+0.310	<.001	<.001	3	9
GBM	NFIA →	+0.540	+0.750	<.001	<.001	3	5
BRCA	SOX6_S411 →	+1.147	+0.407	.009	.009	2	5
BRCA	SOX6_S454 →	+1.033	+0.444	<.001	<.001	3	4
GBM	CRYBG3_S931 →	-0.715	-0.835	<.001	<.001	3	4
LUAD	ARHGEF12 →	+0.152	+0.204	.002	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,762 associations by consensus.

SOX9-AS1 vs SOX9 — LSCC

Explore this scatter interactively →