SNU13

Across TCGA patient cohorts, SNU13 protein abundance is significantly associated with the RNA expression of many other genes, with 13,953 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNU13-associated genes across cancer lineages are TREM1, NLRP3, and FCGR3B. Each is linked with SNU13 in more than 5 cancer types. Because this analysis shows association rather than direction, both SNU13-to-partner and partner-to-SNU13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNU13 versus TREM1 in GBM, with a Pearson correlation of -0.26.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNU13→partner) and Y-score (partner→SNU13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	TREM1 →	-1.098	-0.269	.001	.004	3	6
HNSC	NLRP3 →	-0.915	-0.341	<.001	<.001	3	6
PDAC	FCGR3B →	-1.802	-0.244	<.001	.005	3	6
COAD	CCR1 →	-1.121	-0.306	<.001	<.001	3	6
GBM	CD163 →	-1.498	-0.309	<.001	.004	3	6
UCEC	CXCR2 →	-1.013	-0.326	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,953 associations by consensus.

SNU13 vs TREM1 — GBM

Explore this scatter interactively →