SNTA1

Across TCGA patient cohorts, SNTA1 protein abundance is significantly associated with the RNA expression of many other genes, with 20,883 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNTA1-associated genes across cancer lineages are LDB3, TAL1, and EMCN. Each is linked with SNTA1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SNTA1-to-partner and partner-to-SNTA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNTA1 versus LDB3 in HNSC, with a Pearson correlation of 0.80.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNTA1→partner) and Y-score (partner→SNTA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	LDB3 →	+1.563	+1.039	<.001	<.001	3	8
CCRCC	TAL1 →	+0.949	+0.304	<.001	.002	3	8
CCRCC	EMCN →	+1.289	+0.325	.001	.001	3	8
GBM	ASPA →	+1.306	+0.567	<.001	<.001	3	7
PDAC	FHL5 →	+0.989	+0.408	<.001	<.001	3	7
HNSC	CASQ2 →	+2.309	+0.922	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,883 associations by consensus.

SNTA1 vs LDB3 — HNSC

Explore this scatter interactively →