SNORD3B-2

Across TCGA patient cohorts, SNORD3B-2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,725 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible SNORD3B-2-associated GO terms across cancer lineages are U2-type prespliceosome assembly, Mitochondrial gene expression, and Oxidative phosphorylation. Each is linked with SNORD3B-2 in more than 16 cancer types. Because this analysis shows association rather than direction, both SNORD3B-2-to-partner and partner-to-SNORD3B-2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, U2-type prespliceosome assembly grouped by SNORD3B-2-low versus SNORD3B-2-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD3B-2→partner) and Y-score (partner→SNORD3B-2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	U2-type prespliceosome assembly →	+0.072	+0.422	.002	<.001	3	15
ESCA	Mitochondrial gene expression →	+0.034	+0.292	.006	<.001	1	17
ESCA	Oxidative phosphorylation →	+0.040	+0.276	.003	<.001	3	15
SARC	Metaphase chromosome alignment →	+0.031	+0.349	<.001	<.001	3	14
LUSC	DNA conformation change →	+0.024	+0.091	<.001	<.001	3	14
SARC	Mitotic spindle assembly →	+0.028	+0.249	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,725 associations by consensus.

U2-type prespliceosome assembly by SNORD3B-2 expression — ESCA

Explore this box plot interactively →