SNORD115-34

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNORD115-34 mutation is significantly associated with the RNA expression of many other genes, with 47 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SNORD115-34-associated genes across cancer lineages are RIMBP3B, RNU1-68P, and TRBV11-3. Each is linked with SNORD115-34 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD115-34-to-partner and partner-to-SNORD115-34 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD115-34→partner) and Y-score (partner→SNORD115-34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRIMBP3B →+0.040+3.833<.001.00531
UCECRNU1-68P →+0.171+4.877<.001.00331
UCECTRBV11-3 →+0.439+3.756.002.00631
SKCMACTR6P1 →+0.044+7.816<.001.00831
LUADELOAP1 →+0.031+5.888<.001.00231
LUADTOMM22P4 →+0.172+8.342<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 47 associations by consensus.

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