SNCAIP

Across TCGA patient cohorts, SNCAIP protein abundance is significantly associated with the RNA expression of many other genes, with 4,929 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SNCAIP-associated genes across cancer lineages are LIN7A, BMP2, and ANKRD29. Each is linked with SNCAIP in more than 1 cancer types. Because this analysis shows association rather than direction, both SNCAIP-to-partner and partner-to-SNCAIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNCAIP versus LIN7A in UCEC, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNCAIP→partner) and Y-score (partner→SNCAIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	LIN7A →	+1.299	+0.481	<.001	<.001	3	2
LUAD	BMP2 →	+1.230	+0.603	.003	.003	3	2
LUAD	ANKRD29 →	+0.907	+0.560	.009	.002	3	2
LUAD	KIT →	+1.121	+0.795	.008	.001	3	2
UCEC	DPY19L2 →	+0.900	+0.347	.001	.001	3	2
GBM	LINC02742 →	-1.058	-0.413	<.001	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,929 associations by consensus.

SNCAIP vs LIN7A — UCEC

Explore this scatter interactively →