SNCAIP

Across TCGA cell cohorts, SNCAIP RNA expression is significantly associated with the go_rna of many other GO terms, with 3,196 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SNCAIP-associated GO terms across cancer lineages are Regulation of syncytium formation by plasma membrane fusion, Calcium ion transport, and RNA catabolic process. Each is linked with SNCAIP in more than 9 cancer types. Because this analysis shows association rather than direction, both SNCAIP-to-partner and partner-to-SNCAIP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of syncytium formation by plasma membrane fusion grouped by SNCAIP-low versus SNCAIP-high in LUNG_NSCLC_LUAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNCAIP→partner) and Y-score (partner→SNCAIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUAD	Regulation of syncytium formation by plasma membrane fusion →	+0.048	+0.333	<.001	<.001	3	10
LUNG_NSCLC_LUSC	Calcium ion transport →	-0.064	-1.370	.001	.002	3	10
OESOPHAGUS	RNA catabolic process →	+0.067	+1.523	.001	<.001	3	9
BLOOD_Lymphoma	Establishment of protein localization to organelle →	+0.034	+0.606	<.001	.003	3	9
CNS	Nucleic acid transport →	+0.082	+1.767	<.001	<.001	3	9
CNS	RNA transport →	+0.082	+1.767	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,196 associations by consensus.

Regulation of syncytium formation by plasma membrane fusion by SNCAIP expression — LUNG_NSCLC_LUAD

Explore this box plot interactively →